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Phytomyxid infection of the seagrass Halophila stipulacea: phylogeny, distribution and new insights into its life cycle
Kolátková, Viktorie ; Vohník, Martin (advisor) ; Škaloud, Pavel (referee)
Marine phytomyxids (Cercozoa: Phytomyxea) represent a group of obligate biotrophic eukaryotes known for infecting several algae and oomycetes and counted among three taxa generally reported to behave as seagrass-pathogens. Due to their low-key nature, they are observed only sporadically and very limited information about their diversity, life cycles or distribution is available. In order to extend the knowledge of this enigmatic group of marine protists, an extensive research on a phytomyxid found in the invasive seagrass Halophila stipulacea was carried out. In situ observations, light and scanning electron microscopy and molecular methods were used to approach the species' ecology, geographical range and phylogenetic placement within the class Phytomyxea. The organism was confirmed to be present in the Red, the Mediterreanean and the Caribbean Sea, suggesting a potential case of a host-parasite comigration on a global scale. Phylogenetically it represents the first and so far the only described member of the "TAGIRI-5 environmental clade" - possibly a whole new order within the Phytomyxea, outside the already established Plasmodiophorida and Phagomyxida. The infection rates and times of occurrence are specified for all the finding-sites, indicating an interesting seasonal pattern in the...
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Nonlinear phenomena in electrokinetic chromatography
Dovhunová, Magda ; Dubský, Pavel (advisor) ; Koval, Dušan (referee) ; Ševčík, Juraj (referee)
Capillary electrophoresis often uses complexing agents since the interaction between the analyte and the complexing agent can result in achieving or improving the separation. Examples of such methods can be electrokinetic chromatography or affinity capillary electrophoresis (ACE). ACE is used to determine the complexing parameters. In case of chiral separation, this issue gets complicated, since the parameters of the two analytes (enantiomers) are not completely independent to one another. Therefore, a procedure has been proposed in this thesis, that should always be used to evaluate the complexing parameters of two enantiomers. Statistical evaluation of these parameters was assessed as well. This work also proposes a method that allows to determine the relative migration order of two enantiomers in two different complexing separation systems. The mathematical description of electrophoresis is based on continuity equations, that are inherently nonlinear. However, these equations can be linearized to obtain an approximate analytical solution. There was recently presented a generalized model, that enables inclusion of complete complexing equilibria in the theoretical description of electromigration. Thus, various phenomena, including nonlinear ones, associated with complexation can be predicted. This...
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Phytomyxid infection of the seagrass Halophila stipulacea: phylogeny, distribution and new insights into its life cycle
Kolátková, Viktorie ; Vohník, Martin (advisor) ; Škaloud, Pavel (referee)
Marine phytomyxids (Cercozoa: Phytomyxea) represent a group of obligate biotrophic eukaryotes known for infecting several algae and oomycetes and counted among three taxa generally reported to behave as seagrass-pathogens. Due to their low-key nature, they are observed only sporadically and very limited information about their diversity, life cycles or distribution is available. In order to extend the knowledge of this enigmatic group of marine protists, an extensive research on a phytomyxid found in the invasive seagrass Halophila stipulacea was carried out. In situ observations, light and scanning electron microscopy and molecular methods were used to approach the species' ecology, geographical range and phylogenetic placement within the class Phytomyxea. The organism was confirmed to be present in the Red, the Mediterreanean and the Caribbean Sea, suggesting a potential case of a host-parasite comigration on a global scale. Phylogenetically it represents the first and so far the only described member of the "TAGIRI-5 environmental clade" - possibly a whole new order within the Phytomyxea, outside the already established Plasmodiophorida and Phagomyxida. The infection rates and times of occurrence are specified for all the finding-sites, indicating an interesting seasonal pattern in the...
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